SubtiBank SubtiBank
Version comparison:

2017-09-28 13:43:402025-05-23 02:41:16

locus

BSU12380

BSU_12380

geneLength

1440

1443

outlinks

bsu

BSU12380

BSU_12380

Gene

Coordinates

1,309,880 → 1,311,322

1,309,880 1,311,322

The protein

Catalyzed reaction/ biological activity

D-altronate + NAD+ = D-tagaturonate + NADH (according to Swiss-Prot)

D-altronate + NAD+ --> keto-D-tagaturonate + NADH (according to UniProt)

The protein

Protein family

UxaB subfamily (according to Swiss-Prot)

mannitol dehydrogenase family (with [[protein|MtlD]], according to UniProt)

Biological materials

Mutant

MGNA-A373 (yjmI::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/373 NBRP B. subtilis, Japan]

BKE12380 (Δ[[gene|uxaB]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE12380 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACCCTTATTGCCTCCCTCT, downstream forward: _UP4_TGCATACAAGGGGGAGAGGT

BKK12380 (Δ[[gene|uxaB]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK12380 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACCCTTATTGCCTCCCTCT, downstream forward: _UP4_TGCATACAAGGGGGAGAGGT

MGNA-A373 (yjmI::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/373 NBRP B. subtilis, Japan]

BKE12380 ([[gene|uxaB]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE12380 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACCCTTATTGCCTCCCTCT, downstream forward: _UP4_TGCATACAAGGGGGAGAGGT

BKK12380 ([[gene|uxaB]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK12380 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACCCTTATTGCCTCCCTCT, downstream forward: _UP4_TGCATACAAGGGGGAGAGGT

The protein

Paralogous protein(s)

[[this]]

The protein

Structure

[PDB|4IM7] (YdfI from E. coli, aa 1 - 370, 26% identity)